ICG2013
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24th May, 2012
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Plenary Session
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Huanming Yang (BGI, China)
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Welcome Speech
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Lars Bolund (Aarhus University, Denmark)
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Chronic Diseases versus Healthy Aging —Towards a Major Shake-up in the History of Medicine
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Rolf Müller (Helmholtz Institute for Pharmaceutical Research Saarland, Germany)
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Impact of microbial genomics on natural product research
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Lennart Hammarström (Karolinska Institute, Sweden)
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Genetics of primary immunodeficiency disorders
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Jun Wang (BGI, China)
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Sequencing, Sequencing, and Sequencing: M&M&M projects
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Chair: Harold Swerdlow (WellcomeTrust Sanger Institute, UK)
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Next-Generation and 3rd-Generation platforms at Sanger: Lessons and Outlook.
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Jörn Kalinowski (CeBiTec Bielefeld University, Germany)
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Transcriptome Sequencing of Bacteria with Biotechnological or Medical Relevance
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Johan den Dunnen (Leiden Genome Technology Center, the Netherlands)
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New NGS-applications in the Leiden Genome Technology Center
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Geoffrey Berguet (Diagenode,Germany)
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Automated System for epigenetic applications
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Session 2: Data/ Bio Cloud Computing
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Chair: Søren Brunak (Technical university of Denmark, Denmark)
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Interfacing disease phenotypes from electronic patient records to the underlying network biology
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Scott Edmunds (GigaScience/BGI Shenzhen, China)
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Data Dissemination in the Era of “Big-Data”
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Christian Schlötterer (Vetmeduni Vienna, Austria)
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Pool-Seq: from data analysis to biological inference
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Yan Li (BGI-Shenzhen, China)
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Hecate and Gaea – Flexible Cloud Computing Frameworks for Genome de novo Assembly and Re-sequencing Analysis
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Session 3: Human Disease (I)
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Chair: Eric Metzger (University of Freiburg Medical Center, Germany)
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Function of histone demethylases in human disease
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Lachlan Coin (Imperial College London, UK)
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Assessing the impact of rare and common copy number variation on disease risk
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Joris Veltman (RUNMC, the Netherlands)
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Diagnostic exome sequencing
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Oluf Borbye Pedersen (University of Copenhagen, Denmark)
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Exploring variation in the human genome and the gut microbiome in relation to the pathogenesis of common metabolic disorders
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Tina Buchholz (TU Munich & Centre for Reproductive Genetics, Gyn-Gen-Lehel, Germany)
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Reproductive genetics: testing strategies for diagnostics and treatment
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Caroline Adelfalk (Reproductive Genetics, Gyn-Gen-Lehel, Germany )
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Meiotic mouse models instigate the genetic analysis in women with repetitive aneuploid conceptuses
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Manel Esteller (IDIBELL, Spain)
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Cancer Epigenomics: From DNA Methylation to Non-coding RNA
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Session 4: Microbial & Meta Sequencing
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Fredrik Bäckhed (University of Gothenburg, Sweden)
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The intestinal microbiota: A key player in obesity and related disorders?
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Wang Hui (NERC, UK)
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Viromes in the environment
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Lisa Crossman (The Genome Analysis Center, UK)
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Crowdsourcing the Outbreak E.coli 2011
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Jeroen Raes (VIB ,Belgium)
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Getting more out of your metagenome: methods for studying the human microbiota in health and disease
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Michiel Kleerebezem (Wageningen University, the Netherlands)
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Functional metagenomics of the small intestine microbiota in humans
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Chair: Karsten Kristiansen (University of Copenhagen, Denmark)
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The mouse gut metagenome
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25th May, 2012
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Session 5: Human Disease (II)
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Chair: Stephan Beck (UCL Cancer Institute, UK)
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EWAS: the new kid on the block for epigenome-wide association studies
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Mark McCarthy (University of Oxford, UK)
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Sequence-based risk variant discovery in type 2 diabetes
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Norbert Hübner (Max Delbrück Center for Molecular Medicine)
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Genomics approaches to cardiovascular and metabolic phenotypes
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Bodo M.H. Lange (MPI-molecular genetics, Germany)
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Systems Biology Modelling for Developing New Approaches in Cancer Research, Treatment and Biomarker Discovery
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Tapio Visakorpi (University of Tampere, Finland)
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Tim Spector (King’s College London, UK)
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Large Scale Epigenomics for Common Diseases - The EpiTWINStudy
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Ming Qi (BGI, China)
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Research and Clinical Testing of Inherited Eye Diseases by Targeted Capture Gene Panel and Exome Sequencing
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Session 6: Plant and Animal Genomics
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Chair: Alan Schulman (University of Helsinki, Finland)
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Map-based cloning of a major resistance gene for stripe rust in wheat
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Martien Groenen (Wageningen University, the Netherlands)
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Genome evolution in the pig and related Studies
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Mikkel Heide Schierup (Aarhus University, Denmark)
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Population genomics of the great apes and their ancestral species
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Shuxun Yu (Cotton Research Institute -Chinese Academy of Agricultural Sciences, China)
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The genome of a diploid cotton Gossypiumraimondii
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Sanne Nygaard (University of Copenhagen, Denmark)
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Evolutionary transitions in fungus-farming ants: A whole-genome sequencing approach
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Mick Watson (Roslin/Ark Genomics, UK)
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Sequence assembly, visualization and analysis of animal genomes
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Riccardo Velasco (Fondazione Edmund Mach, Italy)
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Genomic based apple breeding
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Session 7: Diagnosis and Clinical Sequencing
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Chair: William Newman (University of Manchester, UK)
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Benefits and pitfalls of next generation sequencing in the diagnosis of single gene disorders
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Hui Jiang (BGI, China)
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Massively Parallel Sequencing for Human Blastocyst Trophectoderm Cells Chromosomal Abnormality Screening
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Adrián Llerena (Extremadura University Hospital, Spain)
Pharmacogenetics in hispanics:Clinical relevance for antidepressant drugs response and suicide
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Video
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András Falus (Semmelweis University, Hungary)
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Asthma endophenotypes and polymorphisms in the histamine receptor HRH4 gene
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Hans Lehrach (Max Planck Institute for Molecular Genetics, Germany)
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The Future of Medicine
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Fredrik Dahl (Agilent)
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HaloPlex PCR, a simple and high-performing approach for targeted re-sequencing
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Session 8: Bio-banking
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Chair: Cisca Wijmenga (University Medical Centre Groning, the Netherlands)
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Genome of the Netherlands: family-based whole genome sequencing of 250 Dutch trio families
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Zhengming Chen (Oxford University, UK)
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Unveiling the genetic and non-genetic causes of chronic diseases in China: the Kadoorie Biobank study
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Mark Divers (Karolinska Institute Biobank, Sweden)
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Building a modern Biobank in Sweden for new and future needs
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Rita Lawlor (ARC-NET Cancer Research Centre, Italy)
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Thorkild I.A. Sørensen (University of Copenhagen, Denmark)
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Large-scale molecular genetic epidemiology: the challenges of combining with environmental exposures
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Workshop on ELSIs
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26th May, 2012
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Workshop: Improving Biotech Collaboration
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